Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015860460.1_cds_XP_016514654.1_27083
CDS Infomation

[gene=LOC107831406] [db_xref=GeneID:107831406] [protein=U-box domain-containing protein 62-like] [protein_id=XP_016514654.1] [location=join(12078..12552,12660..12894,14670..14751,15611..15668,16713..16801,16980..17075,17160..17230,18296..18419)] [gbkey=CDS]
Sequence

ATGGCTTCTGAAGAAATGGGCCTGGTTTCGACCCGACGAGTGGAAAATGGACTCAATCCA
CACTCACAGCTCGTTTTCCATGAAACTTTCAGCTGTGGCCCACCACCACCACCTCCTCAT
CGCTGCGCCGCCGCCATTACCGGTGATCCGGGCCCAAAAACGACCCGAGAACTTACCGGA
TTCATTGACAAGTACGATAATAATCATCACCACCATTACTTCACTCATCAACCGCAAGCT
GCCGATTTTCGCCGTCAAATGTTCACCGACGACCGACGTGGCTATGGATCGGAGGATGAT
CACGTGGATGATGACGAGGATGATGACGATAATGATGATGACGATGAAAATGAAGCTGAA
GGCATTGTTATAGTTGAAAATAGTAATAATAATAATAATAATAATAGTGATAAAGTTAAT
AATAACTGTAATAGTAAAATTGGCAGTGAAAAACCAAAAACCCTTTCTGTCTTTGGTGCT
AAGGAATCAGGAAATGAGGGCGGCATGGACGCGAGAAATGCAGTGACAATTGCTAGTGTT
GATGGGGAGGTGTATTATAATAGTCAATATTTGCAGGGAAGGGAAGGGTCAAATGCAGGG
CCGAAGGAAATGGGGTTTGAGAATGGGTGTGGGTTTAGTGGGAGAAAGGAAGGTTGTTAT
TCAAGTGAATCGGGAGAGTCTTTGAGAGCTATTCTCTCCGATCCAATTATGGGAGCACTT
ATGGATGATGCGATGATATTGCCTTGTGGGCATTCCTTTGGTAGTGGTGGAGTGCAGCAT
GTGATTAGAATGAAAGCTTGCTATATCTGTTCACACGTGGTGTCTGAAGATTTAGTGGCG
CCAAATTTATCTCTTCGAGCTGCAGTTCAAGCATTCCGTCGAGAAGAGGAATCACAGCTT
AATCGTTCTTTAAAAAGAAGAAAGGAGAGATATGACCAGGATAGAGGGACCTTTGGTGAT
TCACCGCTCTCGGATCATCTAAGAGGAAGAGGCGTTCAGTTTCCATTTGCTGTCACAGAC
AGGGTTATTATAAAGGGTAACAAAAGGACACCTCAGCGTTTTGTGGGTCGTGAGGCTGTT
GTTACCACTCAGTGCTTGAATGGATGGTATGTTGTAAAGACACTAGACAATGCTGAGAGT
GTAAAGTTGCAATATCGCTCCCTAGCCAAGGTTTCAGATAACTTATCAATCCAGCCAATA
TCAAGTAAGACGGCAGCCAATTGGCTGTAG

Peptide Sequence

PEP ID

XP_016514654.1
PEP Infomation

PREDICTED: U-box domain-containing protein 62-like [Nicotiana tabacum]
Sequence

MASEEMGLVSTRRVENGLNPHSQLVFHETFSCGPPPPPPHRCAAAITGDPGPKTTRELTG
FIDKYDNNHHHHYFTHQPQAADFRRQMFTDDRRGYGSEDDHVDDDEDDDDNDDDDENEAE
GIVIVENSNNNNNNNSDKVNNNCNSKIGSEKPKTLSVFGAKESGNEGGMDARNAVTIASV
DGEVYYNSQYLQGREGSNAGPKEMGFENGCGFSGRKEGCYSSESGESLRAILSDPIMGAL
MDDAMILPCGHSFGSGGVQHVIRMKACYICSHVVSEDLVAPNLSLRAAVQAFRREEESQL
NRSLKRRKERYDQDRGTFGDSPLSDHLRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV
VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVSDNLSIQPISSKTAANWL

Transcript Sequence

Gene sequence data has not been registered.